BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C10LP1|AL429369
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1753 1708 0.0
>3x_Contig1753
Length = 23959
Score = 1708 bits (861), Expect = 0.0
Identities = 888/895 (99%), Gaps = 2/895 (0%)
Strand = Plus / Minus
Query: 11 aatataaacaaagttatgaggaaagagaaggaggaaaaaaataaacaaataaaaacaaat 70
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12958 aatacaaacaaagatatgaggaaagagaaggaggaaaaaaataaacaaataaaaacaaat 12899
Query: 71 aaataaacaatttaaagtggttaaataagcgaacacagacgtgattgtgaacaggcttgc 130
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12898 aaataaacaatttaaagtggttaaataagtgaacacagacgtgattgtgaacaggcttgc 12839
Query: 131 acgggttagagataactttatagataacagctgtgagaactcgtctatttcgatttgtta 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12838 acgggttagagataactttatagataacagctgtgagaactcgtctatttcgatttgtta 12779
Query: 191 gtttgtttgtttaatatactgtggacaagactactatttttacctatattatatttcact 250
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 12778 gtttgtttgtttaatatactgtggacaagactactatttttacccatattatatttcact 12719
Query: 251 tttttcttgtaaaggacagagagatcgcataattatttttttttcttgaaagaacaagga 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12718 tttttcttgtaaaggacagagagatcgcataattatttttttttcttgaaagaacaagga 12659
Query: 311 tcaacaattactggattatagatacccctcgattgtatcaacaccaagtctttctacaat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12658 tcaacaattactggattatagatacccctcgattgtatcaacaccaagtctttctacaat 12599
Query: 371 ttgcctgtgctgtgtttcttcaattgtcattttttgagatcagatcaataacgcgctcag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12598 ttgcctgtgctgtgtttcttcaattgtcattttttgagatcagatcaataacgcgctcag 12539
Query: 431 agatattctaaaacatgagagagatcattcatttgtccacaggtcaatgtggtaaccaaa 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12538 agatattctaaaacatgagagagatcattcatttgtccacaggtcaatgtggtaaccaaa 12479
Query: 491 ttggtgctgcgttttgggaaactatttgtggtgaacacggtttggattttgaaggtaact 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12478 ttggtgctgcgttttgggaaactatttgtggtgaacacggtttggattttgaaggtaact 12419
Query: 551 atcacggtatcgatgatattcaaaaggctagattgaacgtttactttaacgaagcctctt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12418 atcacggtatcgatgatattcaaaaggctagattgaacgtttactttaacgaagcctctt 12359
Query: 611 ctggtaaatgggttccaagatccgttaacattgatttggaacctggtaccattgatgctg 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12358 ctggtaaatgggttccaagatccgttaacattgatttggaacctggtaccattgatgctg 12299
Query: 671 tacgtaactctaagattggtactttgttcagaccagataactacattttcggtcaatctt 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12298 tacgtaactctaagattggtactttgttcagaccagataactacattttcggtcaatctt 12239
Query: 731 cagcaggtaacgtgtgggctaaaggtcattacactgagggtgctgaattggtggattctg 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12238 cagcaggtaacgtgtgggctaaaggtcattacactgagggtgctgaattggtggattctg 12179
Query: 791 tcatggacgttgtcagacgtgaagctgaaggttgtgactctttgcaaggtttccaaatcg 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12178 tcatggacgttgtcagacgtgaagctgaaggttgtgactctttgcaaggtttccaaatcg 12119
Query: 851 cccattcccttggtggtggta-cggttctggtatggg-wctttgttgatctctaa 903
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 12118 cccattcccttggtggtggtaccggttctggtatgggtactttgttgatctctaa 12064
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9304
Number of Sequences: 1807
Number of extensions: 9304
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)